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- rs554260538[chr12:100024612]
Enhancers that have rs554260538[chr12:100024612]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr12 |
100019425 |
100026655 |
enh2560 |
|
|
Transcript factors that have rs554260538[chr12:100024612]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr12
|
100024597
|
100024615
|
RARA
|
JASPAR
|
yes
|
|
123197153
|
|
|
chr12
|
100024601
|
100024615
|
RXRB
|
JASPAR
|
yes
|
|
123197154
|
|
|
chr12
|
100024601
|
100024615
|
RXRG
|
JASPAR
|
yes
|
|
123197155
|
|
|
chr12
|
100024601
|
100024616
|
HNF4G
|
JASPAR
|
yes
|
|
123197156
|
|
|
chr12
|
100024604
|
100024617
|
NR2F1
|
JASPAR
|
yes
|
|
123197157
|
|
|
chr12
|
100024606
|
100024617
|
ESRRA
|
JASPAR
|
yes
|
|
123197158
|
|
|
chr12
|
100024607
|
100024615
|
NR4A2
|
JASPAR
|
yes
|
|
123197159
|
|
|
chr12
|
100024607
|
100024622
|
HNF4A
|
JASPAR
|
yes
|
|
123197160
|
|
|
chr12
|
100024608
|
100024622
|
NR2F1
|
JASPAR
|
yes
|
|
123197161
|
|
|
chr12
|
100024608
|
100024622
|
RXRB
|
JASPAR
|
yes
|
|
123197162
|
|
|
chr12
|
100024608
|
100024622
|
RXRG
|
JASPAR
|
yes
|
|
123197163
|
|
|
chr12
|
100024608
|
100024623
|
HNF4G
|
JASPAR
|
yes
|
|
123197164
|
|
|
chr12
|
100024608
|
100024623
|
NR2C2
|
JASPAR
|
yes
|
|
123197165
|
|
|
chr12
|
100024609
|
100024623
|
TCF7L2
|
JASPAR
|
yes
|
|
123197166
|
|
|
chr12
|
100024611
|
100024618
|
TCF4
|
TRANSFAC
|
yes
|
|
123197167
|
|
|
chr12
|
100024612
|
100024618
|
LEF1
|
TRANSFAC
|
yes
|
|
123197168
|
|
|
chr12
|
100024612
|
100024618
|
TCF4
|
TRANSFAC
|
yes
|
|
123197169
|
|
Genes associated with rs554260538[chr12:100024612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |