-
Home
- SNP
- rs554534854[chr16:409004]
Enhancers that have rs554534854[chr16:409004]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
408365 |
414375 |
enh92627 |
|
|
Transcript factors that have rs554534854[chr16:409004]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
408934
|
409390
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21683995
|
|
|
chr16
|
408981
|
409357
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Liver (HepG2)
|
21683996
|
|
|
chr16
|
408988
|
409009
|
IRF1
|
JASPAR
|
yes
|
|
9108416
|
|
|
chr16
|
408989
|
409004
|
FOXP1
|
JASPAR
|
yes
|
|
9108417
|
|
|
chr16
|
408989
|
409010
|
IRF1
|
JASPAR
|
yes
|
|
9108418
|
|
|
chr16
|
408990
|
409005
|
FOXP1
|
JASPAR
|
yes
|
|
9108419
|
|
|
chr16
|
408990
|
409011
|
IRF1
|
JASPAR
|
yes
|
|
9108420
|
|
|
chr16
|
408991
|
409006
|
FOXP1
|
JASPAR
|
yes
|
|
9108421
|
|
|
chr16
|
408991
|
409012
|
IRF1
|
JASPAR
|
yes
|
|
9108422
|
|
|
chr16
|
408992
|
409007
|
FOXP1
|
JASPAR
|
yes
|
|
9108423
|
|
|
chr16
|
408992
|
409013
|
IRF1
|
JASPAR
|
yes
|
|
9108424
|
|
|
chr16
|
408993
|
409008
|
FOXP1
|
JASPAR
|
yes
|
|
9108425
|
|
|
chr16
|
408995
|
409010
|
FOXP1
|
JASPAR
|
yes
|
|
9108426
|
|
|
chr16
|
408996
|
409017
|
IRF1
|
JASPAR
|
yes
|
|
9108427
|
|
|
chr16
|
408997
|
409012
|
FOXP1
|
JASPAR
|
yes
|
|
9108428
|
|
|
chr16
|
408997
|
409018
|
IRF1
|
JASPAR
|
yes
|
|
9108429
|
|
|
chr16
|
408998
|
409019
|
IRF1
|
JASPAR
|
yes
|
|
9108430
|
|
|
chr16
|
409002
|
409017
|
PRDM1
|
JASPAR
|
yes
|
|
9108431
|
|
|
chr16
|
409002
|
409023
|
IRF1
|
JASPAR
|
yes
|
|
9108432
|
|
|
chr16
|
409003
|
409018
|
FOXP1
|
JASPAR
|
yes
|
|
9108433
|
|
Genes associated with rs554534854[chr16:409004], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |