EnhancerDB
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  3. rs554538044[chr15:40386501]
Enhancers that have rs554538044[chr15:40386501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554538044[chr15:40386501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40386491 40386503 NHLH1 JASPAR yes 22928741
chr15 40386492 40386502 MSC JASPAR yes 22928742
chr15 40386492 40386502 NHLH1 JASPAR yes 22928743
chr15 40386492 40386502 TFAP4 JASPAR yes 22928744
Genes associated with rs554538044[chr15:40386501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More