EnhancerDB
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  3. rs554588224[chr16:89132527]
Enhancers that have rs554588224[chr16:89132527]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89124640 89136375 enh60640
Cervix (HeLa-S3) Epithelial (MCF-7) Blood (OCI-LY7) Blood (GM12878)
Transcript factors that have rs554588224[chr16:89132527]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89131654 89133120 ZNF143 GTRD no Epithelial (MCF-7) 21737965
chr16 89131654 89133120 ZNF143 GTRD no Epithelial (MCF-7) 108224974
chr16 89131679 89134725 ZNF143 GTRD no Epithelial (MCF-7) 21737966
chr16 89131679 89134725 ZNF143 GTRD no Epithelial (MCF-7) 108224975
chr16 89131812 89133777 TCF7L2 GTRD no Colon (HCT116) 108224977
chr16 89131815 89134310 TCF7L2 GTRD no Colon (HCT116) 108224978
chr16 89131819 89133891 TCF7L2 GTRD no Colon (HCT116) 108224979
chr16 89131924 89133895 ZNF143 GTRD no Epithelial (MCF-7) 21737968
chr16 89131924 89133895 ZNF143 GTRD no Epithelial (MCF-7) 108224982
chr16 89132284 89133190 ZNF143 GTRD no Epithelial (MCF-7) 21737969
chr16 89132305 89133020 ZNF274 GTRD no Cervix (HeLa-S3) 21737970
chr16 89132321 89132979 ZNF143 GTRD no Epithelial (MCF-7) 21737971
chr16 89132325 89132982 ZNF143 GTRD no Epithelial (MCF-7) 21737972
chr16 89132455 89132898 ZNF143 GTRD no Epithelial (MCF-7) 21737973
chr16 89132474 89132860 ZNF274 GTRD no Blood (GM12878) 21737974
chr16 89132474 89132883 ZNF274 GTRD no Cervix (HeLa-S3) 21737975
chr16 89132521 89132536 TFAP2C JASPAR yes 12321334
chr16 89132522 89132533 TFAP2A JASPAR yes 12321335
chr16 89132522 89132533 TFAP2B JASPAR yes 12321336
chr16 89132522 89132533 TFAP2C JASPAR yes 12321337
chr16 89132523 89132532 TFAP2A JASPAR yes 12321338
chr16 89132527 89132542 NR2C2 JASPAR yes 12321339
Genes associated with rs554588224[chr16:89132527], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More