EnhancerDB
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  3. rs554598839[chr15:40398496]
Enhancers that have rs554598839[chr15:40398496]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs554598839[chr15:40398496]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40397612 40398599 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21650434
chr15 40397612 40398599 POLR2A UCSC Txn Factor no Conserved 108134318
chr15 40397612 40398599 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108134319
chr15 40398491 40398501 NFKB1 JASPAR yes 22930237
chr15 40398491 40398502 NFKB1 JASPAR yes 22930238
Genes associated with rs554598839[chr15:40398496], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More