-
Home
- SNP
- rs554840447[chr19:1107221]
Enhancers that have rs554840447[chr19:1107221]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
1105365 |
1110635 |
enh107746 |
|
|
Transcript factors that have rs554840447[chr19:1107221]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
1100833
|
1114469
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108349982
|
|
|
chr19
|
1101106
|
1108337
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108349985
|
|
|
chr19
|
1101212
|
1109642
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349991
|
|
|
chr19
|
1101245
|
1108271
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108349996
|
|
|
chr19
|
1101279
|
1108135
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108350009
|
|
|
chr19
|
1107214
|
1107234
|
RREB1
|
JASPAR
|
yes
|
|
111992529
|
|
|
chr19
|
1107215
|
1107229
|
GLIS3
|
JASPAR
|
yes
|
|
111992530
|
|
|
chr19
|
1107215
|
1107235
|
RREB1
|
JASPAR
|
yes
|
|
111992531
|
|
|
chr19
|
1107216
|
1107228
|
TFAP2A
|
JASPAR
|
yes
|
|
111992532
|
|
|
chr19
|
1107216
|
1107236
|
RREB1
|
JASPAR
|
yes
|
|
111992533
|
|
|
chr19
|
1107217
|
1107237
|
RREB1
|
JASPAR
|
yes
|
|
111992534
|
|
|
chr19
|
1107220
|
1107240
|
RREB1
|
JASPAR
|
yes
|
|
111992535
|
|
Genes associated with rs554840447[chr19:1107221], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |