-
Home
- SNP
- rs554955582[chr3:11809478]
Enhancers that have rs554955582[chr3:11809478]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr3 |
11804405 |
11823339 |
enh20331 |
|
|
Transcript factors that have rs554955582[chr3:11809478]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr3
|
11809466
|
11809479
|
EOMES
|
JASPAR
|
yes
|
|
449621
|
|
|
chr3
|
11809468
|
11809478
|
TBR1
|
JASPAR
|
yes
|
|
449622
|
|
|
chr3
|
11809468
|
11809479
|
TBX20
|
JASPAR
|
yes
|
|
449623
|
|
|
chr3
|
11809468
|
11809479
|
TBX2
|
JASPAR
|
yes
|
|
449624
|
|
|
chr3
|
11809469
|
11809479
|
TBX21
|
JASPAR
|
yes
|
|
449625
|
|
|
chr3
|
11809470
|
11809478
|
MGA
|
JASPAR
|
yes
|
|
449626
|
|
|
chr3
|
11809470
|
11809478
|
TBX15
|
JASPAR
|
yes
|
|
449627
|
|
|
chr3
|
11809470
|
11809478
|
TBX1
|
JASPAR
|
yes
|
|
449628
|
|
|
chr3
|
11809470
|
11809478
|
TBX4
|
JASPAR
|
yes
|
|
449629
|
|
|
chr3
|
11809470
|
11809478
|
TBX5
|
JASPAR
|
yes
|
|
449630
|
|
|
chr3
|
11809470
|
11809479
|
ZEB1
|
JASPAR
|
yes
|
|
449631
|
|
|
chr3
|
11809470
|
11809485
|
SCRT1
|
JASPAR
|
yes
|
|
449632
|
|
|
chr3
|
11809471
|
11809481
|
FIGLA
|
JASPAR
|
yes
|
|
449633
|
|
|
chr3
|
11809471
|
11809481
|
ID4
|
JASPAR
|
yes
|
|
449634
|
|
|
chr3
|
11809471
|
11809481
|
TCF3
|
JASPAR
|
yes
|
|
449635
|
|
|
chr3
|
11809471
|
11809481
|
TCF4
|
JASPAR
|
yes
|
|
449636
|
|
|
chr3
|
11809472
|
11809481
|
SNAI2
|
JASPAR
|
yes
|
|
449637
|
|
|
chr3
|
11809473
|
11809478
|
USF2
|
TRANSFAC
|
yes
|
|
449638
|
|
|
chr3
|
11809478
|
11809488
|
ZNF740
|
JASPAR
|
yes
|
|
449639
|
|
Genes associated with rs554955582[chr3:11809478], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |