-
Home
- SNP
- rs555188542[chr5:78948007]
Enhancers that have rs555188542[chr5:78948007]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr5 |
78947776 |
78951904 |
enh86582 |
|
|
Transcript factors that have rs555188542[chr5:78948007]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr5
|
78947998
|
78948008
|
HOXA13
|
JASPAR
|
yes
|
|
63673108
|
|
|
chr5
|
78947998
|
78948008
|
HOXB13
|
JASPAR
|
yes
|
|
63673109
|
|
|
chr5
|
78947998
|
78948008
|
HOXD13
|
JASPAR
|
yes
|
|
63673110
|
|
|
chr5
|
78947998
|
78948009
|
HOXA10
|
JASPAR
|
yes
|
|
63673111
|
|
|
chr5
|
78947999
|
78948008
|
CDX1
|
JASPAR
|
yes
|
|
63673112
|
|
|
chr5
|
78948006
|
78948017
|
NFIL3
|
JASPAR
|
yes
|
|
63673113
|
|
|
chr5
|
78948007
|
78948019
|
DBP
|
JASPAR
|
yes
|
|
63673114
|
|
|
chr5
|
78948007
|
78948019
|
HLF
|
JASPAR
|
yes
|
|
63673115
|
|
Genes associated with rs555188542[chr5:78948007], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |