EnhancerDB
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  3. rs555227980[chr12:104400163]
Enhancers that have rs555227980[chr12:104400163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 104398205 104406235 enh29939
Astrocyte Prostate (PC-3) Cervix (HeLa-S3)
Transcript factors that have rs555227980[chr12:104400163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 104400151 104400165 ONECUT2 JASPAR yes 123350796
chr12 104400151 104400165 ONECUT3 JASPAR yes 123350797
chr12 104400155 104400170 FOXP1 JASPAR yes 123350798
chr12 104400157 104400168 FOXC1 JASPAR yes 123350799
chr12 104400157 104400169 FOXC2 JASPAR yes 123350800
chr12 104400159 104400173 FOXF2 JASPAR yes 123350801
chr12 104400159 104400173 ONECUT3 JASPAR yes 123350802
chr12 104400159 104400174 FOXP1 JASPAR yes 123350803
chr12 104400159 104400174 HNF1A JASPAR yes 123350804
chr12 104400160 104400174 POU4F1 JASPAR yes 123350805
chr12 104400160 104400175 FOXA1 JASPAR yes 123350806
chr12 104400160 104400176 POU4F2 JASPAR yes 123350807
chr12 104400160 104400176 POU4F3 JASPAR yes 123350808
chr12 104400161 104400172 FOXB1 JASPAR yes 123350809
chr12 104400161 104400172 FOXC1 JASPAR yes 123350810
chr12 104400161 104400172 PROP1 JASPAR yes 123350811
chr12 104400161 104400173 FOXC2 JASPAR yes 123350812
chr12 104400162 104400174 FOXI1 JASPAR yes 123350813
chr12 104400163 104400177 ONECUT2 JASPAR yes 123350814
chr12 104400163 104400177 ONECUT3 JASPAR yes 123350815
chr12 104400163 104400178 FOXP1 JASPAR yes 123350816
chr12 104400163 104400178 HNF1A JASPAR yes 123350817
Genes associated with rs555227980[chr12:104400163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More