EnhancerDB
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  3. rs555279685[chr6:36620855]
Enhancers that have rs555279685[chr6:36620855]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs555279685[chr6:36620855]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36620836 36620856 PPARG JASPAR yes 101354644
chr6 36620850 36620871 IRF1 JASPAR yes 101354645
chr6 36620853 36620857 YY1 TRANSFAC yes 101354646
chr6 36620853 36620868 FOXP1 JASPAR yes 101354647
chr6 36620854 36620869 FOXP1 JASPAR yes 101354648
chr6 36620855 36620870 FOXP1 JASPAR yes 101354649
Genes associated with rs555279685[chr6:36620855], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More