EnhancerDB
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  3. rs555380571[chr19:10139200]
Enhancers that have rs555380571[chr19:10139200]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10135885 10140655 enh17911
Prostate (PC-3) Large Intestine Placenta Pancreas Epithelial (MCF-7)
Transcript factors that have rs555380571[chr19:10139200]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 10136849 10140050 ZNF143 GTRD no Epithelial (MCF-7) 21848326
chr19 10136849 10140050 ZNF143 GTRD no Epithelial (MCF-7) 108382718
chr19 10137628 10139836 TCF7L2 GTRD no Colon (HCT116) 108382720
chr19 10138701 10139812 ZBTB33 GTRD no Brain (SK-N-SH) 108382840
chr19 10138830 10139777 ZNF143 GTRD no Epithelial (MCF-7) 21848333
chr19 10138833 10139293 ZNF143 GTRD no Epithelial (MCF-7) 21848334
chr19 10139182 10139203 IRF1 JASPAR yes 112405953
chr19 10139182 10139203 ZNF263 JASPAR yes 112405954
chr19 10139184 10139205 IRF1 JASPAR yes 112405955
chr19 10139186 10139207 IRF1 JASPAR yes 112405956
chr19 10139190 10139211 IRF1 JASPAR yes 112405957
chr19 10139192 10139207 PRDM1 JASPAR yes 112405958
chr19 10139192 10139207 STAT2 JASPAR yes 112405959
chr19 10139193 10139207 SPIC JASPAR yes 112405960
Genes associated with rs555380571[chr19:10139200], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More