EnhancerDB
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  3. rs555568855[chr15:40396020]
Enhancers that have rs555568855[chr15:40396020]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40386275 40399315 enh3538
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs555568855[chr15:40396020]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40395432 40396102 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134122
chr15 40395486 40396043 TFAP2C UCSC Txn Factor no Conserved 108134128
chr15 40395527 40396043 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650347
chr15 40395527 40396043 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108134131
chr15 40395533 40396063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21650348
chr15 40395533 40396063 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108134132
chr15 40395542 40396052 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21650350
chr15 40395542 40396052 E2F1 UCSC Txn Factor no Conserved 108134134
chr15 40395542 40396052 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108134135
chr15 40395574 40396174 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134142
chr15 40395627 40396147 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134152
chr15 40395643 40396313 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134154
chr15 40395686 40396062 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134159
chr15 40395717 40396047 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134160
chr15 40395746 40396070 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134161
chr15 40395758 40396068 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108134162
chr15 40396016 40396026 ELK1 JASPAR yes 22929968
chr15 40396017 40396028 ELF5 JASPAR yes 22929969
chr15 40396020 40396026 ETS1 JASPAR yes 22929970
Genes associated with rs555568855[chr15:40396020], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More