Enhancers that have rs555856686[chr12:54391357]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54386194 54392720 enh89659

Transcript factors that have rs555856686[chr12:54391357]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54386138 54392385 ZNF274 GTRD no Bone Marrow (K562) 108036708
chr12 54386933 54392979 EZH2 UCSC Txn Factor no Conserved 108036709
chr12 54388093 54394278 ZNF274 GTRD no Bone Marrow (K562) 108036710
chr12 54389428 54392338 TCF7L2 GTRD no Colon (HCT116) 108036711
chr12 54389733 54392065 ZNF274 GTRD no Bone Marrow (K562) 108036712
chr12 54389803 54392076 ZNF274 GTRD no Blood (GM12878) 108036713
chr12 54389851 54392111 ZNF143 GTRD no Epithelial (MCF-7) 108036714
chr12 54389978 54392288 ZNF274 GTRD no Bone Marrow (K562) 108036715
chr12 54390058 54391934 TCF7L2 GTRD no Colon (HCT116) 108036716
chr12 54390063 54391982 ZNF274 GTRD no Bone Marrow (K562) 108036717
chr12 54390083 54392015 ZNF274 GTRD no Bone Marrow (K562) 108036718
chr12 54390085 54392979 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036719
chr12 54390166 54392378 ZNF274 GTRD no Bone Marrow (K562) 108036720
chr12 54390174 54391910 ZNF274 GTRD no Bone Marrow (K562) 108036721
chr12 54390297 54391990 TCF7L2 GTRD no Colon (HCT116) 108036722
chr12 54390506 54391951 TCF7L2 GTRD no Colon (HCT116) 108036723
chr12 54390729 54392268 ZBTB33 GTRD no Lung (A549) 108036724
chr12 54390778 54392022 ZNF274 GTRD no Bone Marrow (K562) 108036725
chr12 54390983 54392051 ZNF274 GTRD no Blood (GM12878) 108036726
chr12 54391085 54392098 ZNF143 GTRD no Epithelial (MCF-7) 108036727
chr12 54391121 54392371 ZBTB33 GTRD no Lung (A549) 108036728
chr12 54391234 54392164 ZNF274 GTRD no Blood (GM12878) 108036729
chr12 54391357 54391372 NR2C2 JASPAR yes 121018342

Genes associated with rs555856686[chr12:54391357], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More