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- rs555860609[chr19:5250628]
Enhancers that have rs555860609[chr19:5250628]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr19 |
5248205 |
5255695 |
enh32877 |
|
|
Transcript factors that have rs555860609[chr19:5250628]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr19
|
5250025
|
5250812
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374815
|
|
|
chr19
|
5250029
|
5250651
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374816
|
|
|
chr19
|
5250133
|
5250933
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374819
|
|
|
chr19
|
5250167
|
5250936
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374820
|
|
|
chr19
|
5250184
|
5250736
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374821
|
|
|
chr19
|
5250382
|
5250858
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374822
|
|
|
chr19
|
5250522
|
5250850
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108374823
|
|
|
chr19
|
5250618
|
5250632
|
PLAG1
|
JASPAR
|
yes
|
|
112223333
|
|
|
chr19
|
5250621
|
5250636
|
ZIC4
|
JASPAR
|
yes
|
|
112223335
|
|
|
chr19
|
5250622
|
5250636
|
ZIC1
|
JASPAR
|
yes
|
|
112223336
|
|
Genes associated with rs555860609[chr19:5250628], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |