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- rs556079517[chr1:31248045]
Enhancers that have rs556079517[chr1:31248045]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
31248003 |
31248390 |
vista1049 |
|
|
Transcript factors that have rs556079517[chr1:31248045]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
31247543
|
31248084
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107802705
|
|
|
chr1
|
31248041
|
31248051
|
SP1
|
JASPAR
|
yes
|
|
118265498
|
|
|
chr1
|
31248043
|
31248048
|
SP1
|
TRANSFAC
|
yes
|
|
118265499
|
|
|
chr1
|
31248044
|
31248063
|
RFX2
|
JASPAR
|
yes
|
|
118265500
|
|
|
chr1
|
31248045
|
31248055
|
RELA
|
JASPAR
|
yes
|
|
118265501
|
|
|
chr1
|
31248045
|
31248055
|
REL
|
JASPAR
|
yes
|
|
118265502
|
|
|
chr1
|
31248045
|
31248056
|
NFKB1
|
JASPAR
|
yes
|
|
118265503
|
|
Genes associated with rs556079517[chr1:31248045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |