EnhancerDB
  1. Home
  2. SNP
  3. rs556240788[chr2:38598340]
Enhancers that have rs556240788[chr2:38598340]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38595865 38602575 enh5422
Blood (Karpas-422)
Transcript factors that have rs556240788[chr2:38598340]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38598333 38598343 ALX3 JASPAR yes 73133043
chr2 38598333 38598343 GSX2 JASPAR yes 73133044
chr2 38598333 38598343 MIXL1 JASPAR yes 73133045
chr2 38598333 38598343 MNX1 JASPAR yes 73133046
chr2 38598334 38598342 ISX JASPAR yes 73133047
chr2 38598334 38598342 LMX1A JASPAR yes 73133048
chr2 38598334 38598342 LMX1B JASPAR yes 73133049
chr2 38598334 38598342 NKX6-1 JASPAR yes 73133050
chr2 38598334 38598342 NKX6-2 JASPAR yes 73133051
chr2 38598334 38598342 PRRX1 JASPAR yes 73133052
chr2 38598334 38598342 RAX2 JASPAR yes 73133053
chr2 38598334 38598342 SHOX JASPAR yes 73133054
chr2 38598334 38598342 UNCX JASPAR yes 73133055
chr2 38598334 38598342 VAX1 JASPAR yes 73133056
chr2 38598335 38598356 IRF1 JASPAR yes 73133057
chr2 38598337 38598352 FOXP1 JASPAR yes 73133058
chr2 38598338 38598353 FOXP1 JASPAR yes 73133059
chr2 38598339 38598345 TBP TRANSFAC yes 73133060
chr2 38598339 38598354 FOXP1 JASPAR yes 73133061
chr2 38598339 38598360 IRF1 JASPAR yes 73133062
chr2 38598340 38598355 FOXP1 JASPAR yes 73133063
Genes associated with rs556240788[chr2:38598340], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More