-
Home
- SNP
- rs556613340[chr16:2058573]
Enhancers that have rs556613340[chr16:2058573]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
2057818 |
2059084 |
vista21564 |
|
|
Transcript factors that have rs556613340[chr16:2058573]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
2057940
|
2058600
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172153
|
|
|
chr16
|
2057985
|
2058803
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172155
|
|
|
chr16
|
2058053
|
2058703
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172163
|
|
|
chr16
|
2058152
|
2058608
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
108172185
|
|
|
chr16
|
2058357
|
2059058
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108172189
|
|
|
chr16
|
2058385
|
2059053
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108172191
|
|
|
chr16
|
2058557
|
2059213
|
E2F1
|
UCSC Txn Factor
|
no
|
Conserved
|
108172193
|
|
|
chr16
|
2058557
|
2059213
|
ZNF217
|
ENCODE Uniform TFBS
|
no
|
Epithelial (MCF-7)
|
108172194
|
|
|
chr16
|
2058569
|
2058825
|
ZBTB33
|
ENCODE Uniform TFBS
|
no
|
Lung (A549)
|
108172195
|
|
Genes associated with rs556613340[chr16:2058573], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |