Enhancers that have rs556721790[chr12:54411920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54405914 54417704 enh86112
chr12 54411861 54412590 vista13554

Transcript factors that have rs556721790[chr12:54411920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54410791 54412222 ZNF274 GTRD no Bone Marrow (K562) 108036751
chr12 54410981 54411992 ZNF274 GTRD no Cervix (HeLa-S3) 108036752
chr12 54411006 54412089 ZBTB33 GTRD no Brain (SK-N-SH) 108036753
chr12 54411087 54412038 ZNF274 GTRD no Bone Marrow (K562) 108036754
chr12 54411095 54412223 ZBTB33 GTRD no Brain (SK-N-SH) 108036755
chr12 54411118 54411940 ZBTB33 GTRD no Brain (SK-N-SH) 108036756
chr12 54411133 54412062 ZBTB33 GTRD no Lung (A549) 108036758
chr12 54411145 54411930 ZBTB33 GTRD no Lung (A549) 108036759
chr12 54411145 54411954 ZBTB33 GTRD no Brain (SK-N-SH) 108036760
chr12 54411180 54411924 ZNF274 GTRD no Cervix (HeLa-S3) 108036761
chr12 54411195 54411942 ZBTB33 GTRD no Brain (SK-N-SH) 108036763
chr12 54411197 54411986 ZBTB33 GTRD no Lung (A549) 108036764
chr12 54411219 54412894 POLR2A UCSC Txn Factor no Conserved 107686658
chr12 54411219 54412894 POLR2A UCSC Txn Factor no Conserved 108036765
chr12 54411220 54412130 ZBTB33 GTRD no Brain (SK-N-SH) 108036766
chr12 54411226 54411954 ZBTB33 GTRD no Brain (SK-N-SH) 108036768
chr12 54411255 54412174 ZBTB33 GTRD no Brain (SK-N-SH) 108036773
chr12 54411322 54412009 ZBTB33 GTRD no Lung (A549) 108036774
chr12 54411326 54411936 ZNF274 GTRD no Blood (GM12878) 108036775
chr12 54411345 54411970 ZNF274 GTRD no Bone Marrow (K562) 108036777
chr12 54411347 54411930 ZNF274 GTRD no Blood (GM12878) 108036778
chr12 54411348 54412019 ZNF274 GTRD no Bone Marrow (K562) 108036779
chr12 54411351 54412048 ZNF274 GTRD no Bone Marrow (K562) 108036780
chr12 54411447 54411932 ZNF274 GTRD no Bone Marrow (K562) 108036781
chr12 54411448 54412024 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036782
chr12 54411450 54411964 ZNF274 GTRD no Blood (GM12878) 108036783
chr12 54411477 54412071 TCF7L2 GTRD no Colon (HCT116) 21550222
chr12 54411477 54412071 TCF7L2 GTRD no Colon (HCT116) 108036785
chr12 54411505 54412077 TCF7L2 GTRD no Colon (HCT116) 21550223
chr12 54411505 54412077 TCF7L2 GTRD no Colon (HCT116) 108036786
chr12 54411507 54412167 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036787
chr12 54411535 54411991 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036790
chr12 54411564 54412060 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036791
chr12 54411579 54412043 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036792
chr12 54411580 54411970 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036793
chr12 54411584 54412254 TCF7L2 GTRD no Colon (HCT116) 21550224
chr12 54411584 54412254 TCF7L2 GTRD no Colon (HCT116) 108036794
chr12 54411596 54411952 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036795
chr12 54411599 54411934 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21550225
chr12 54411599 54411934 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108036798
chr12 54411605 54411979 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036799
chr12 54411613 54411929 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036801
chr12 54411613 54412052 ZNF143 GTRD no Epithelial (MCF-7) 108036802
chr12 54411620 54411930 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036806
chr12 54411628 54412064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036807
chr12 54411630 54412318 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036808
chr12 54411639 54411995 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108036809
chr12 54411641 54412321 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036810
chr12 54411644 54411954 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036812
chr12 54411645 54412400 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036813
chr12 54411646 54412022 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036814
chr12 54411647 54411923 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036815
chr12 54411647 54412220 ELF1 UCSC Txn Factor no Conserved 108036816
chr12 54411648 54412018 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036817
chr12 54411654 54411933 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036819
chr12 54411663 54411932 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108036820
chr12 54411671 54412359 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036821
chr12 54411681 54411977 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 108036822
chr12 54411685 54412005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036823
chr12 54411688 54411968 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036824
chr12 54411690 54411970 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036825
chr12 54411691 54413032 ZNF143 GTRD no Epithelial (MCF-7) 108036826
chr12 54411713 54412093 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036827
chr12 54411719 54412259 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036828
chr12 54411725 54412385 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108036829
chr12 54411729 54412071 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036830
chr12 54411730 54412266 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036832
chr12 54411757 54412013 EGR1 UCSC Txn Factor no Conserved 108036833
chr12 54411757 54412013 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036834
chr12 54411762 54412026 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036835
chr12 54411765 54412361 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036836
chr12 54411775 54412175 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036837
chr12 54411784 54412220 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036838
chr12 54411799 54412109 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108036839
chr12 54411800 54412100 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036840
chr12 54411809 54412333 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21550226
chr12 54411809 54412333 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108036841
chr12 54411810 54412150 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036842
chr12 54411824 54412100 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036843
chr12 54411849 54412179 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036844
chr12 54411851 54411974 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036845
chr12 54411895 54412335 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108036847
chr12 54411901 54412277 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21550227
chr12 54411901 54412277 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108036848
chr12 54411915 54411935 RREB1 JASPAR yes 82411233
chr12 54411915 54411935 RREB1 JASPAR yes 121018832
chr12 54411915 54412219 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036849
chr12 54411918 54411938 RREB1 JASPAR yes 82411234
chr12 54411918 54411938 RREB1 JASPAR yes 121018833
chr12 54411918 54412189 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108036850
chr12 54411920 54412090 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108036851

Genes associated with rs556721790[chr12:54411920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More