EnhancerDB
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  3. rs557385316[chr1:20088084]
Enhancers that have rs557385316[chr1:20088084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20081105 20095655 enh26567
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myotube)
Transcript factors that have rs557385316[chr1:20088084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20088069 20088084 RFX5 JASPAR yes 27215737
chr1 20088078 20088088 RORA JASPAR yes 27215738
chr1 20088079 20088092 NR2F1 JASPAR yes 27215739
chr1 20088083 20088087 ESR1 TRANSFAC yes 27215740
chr1 20088083 20088094 USF1 JASPAR yes 27215741
chr1 20088083 20088103 TP63 JASPAR yes 27215742
chr1 20088084 20088102 TP53 JASPAR yes 27215743
chr1 20088084 20088102 TP63 JASPAR yes 27215744
chr1 20088084 20088102 TP73 JASPAR yes 27215745
Genes associated with rs557385316[chr1:20088084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More