EnhancerDB
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  3. rs55752638[chr16:11409493]
Enhancers that have rs55752638[chr16:11409493]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11409407 11409806 vista21860
VISTA
Transcript factors that have rs55752638[chr16:11409493]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11409212 11409943 ZBTB33 GTRD no Brain (SK-N-SH) 21690579
chr16 11409212 11409943 ZBTB33 GTRD no Brain (SK-N-SH) 108181485
chr16 11409216 11409816 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181486
chr16 11409232 11409902 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181487
chr16 11409238 11409549 ZNF143 GTRD no Epithelial (MCF-7) 21690580
chr16 11409238 11409549 ZNF143 GTRD no Epithelial (MCF-7) 108181488
chr16 11409322 11409988 ZBTB33 GTRD no Brain (SK-N-SH) 108181489
chr16 11409323 11409843 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181490
chr16 11409336 11409666 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181491
chr16 11409372 11409946 ZBTB33 GTRD no Brain (SK-N-SH) 108181492
chr16 11409390 11409726 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181493
chr16 11409398 11409722 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181494
chr16 11409399 11409709 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181495
chr16 11409399 11409723 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181496
chr16 11409403 11409723 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181497
chr16 11409408 11409804 CTCF UCSC Txn Factor no Conserved 108181498
chr16 11409414 11409602 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181499
chr16 11409433 11409677 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181500
chr16 11409438 11409694 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181501
chr16 11409443 11409621 TEAD4 UCSC Txn Factor no Conserved 108181502
chr16 11409443 11409621 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181503
chr16 11409447 11409800 ZBTB33 GTRD no Brain (SK-N-SH) 108181504
chr16 11409466 11409736 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181505
chr16 11409491 11409510 REST JASPAR yes 49341205
Genes associated with rs55752638[chr16:11409493], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More