EnhancerDB
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  3. rs557713065[chr5:172729317]
Enhancers that have rs557713065[chr5:172729317]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs557713065[chr5:172729317]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172729304 172729319 TFAP2C JASPAR yes 67865884
chr5 172729307 172729318 TFAP2A JASPAR yes 67865885
chr5 172729307 172729318 TFAP2B JASPAR yes 67865886
chr5 172729307 172729318 TFAP2C JASPAR yes 67865887
chr5 172729308 172729317 TFAP2A JASPAR yes 67865888
Genes associated with rs557713065[chr5:172729317], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More