EnhancerDB
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  3. rs557792634[chr5:172728828]
Enhancers that have rs557792634[chr5:172728828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs557792634[chr5:172728828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172728820 172728833 ZBTB18 JASPAR yes 67865792
chr5 172728821 172728833 NHLH1 JASPAR yes 67865793
chr5 172728822 172728832 FIGLA JASPAR yes 67865794
chr5 172728822 172728832 MSC JASPAR yes 67865795
chr5 172728822 172728832 MYF6 JASPAR yes 67865796
chr5 172728822 172728832 NHLH1 JASPAR yes 67865797
chr5 172728822 172728832 TFAP4 JASPAR yes 67865798
chr5 172728822 172728834 TAL1 JASPAR yes 67865799
chr5 172728823 172728836 SCRT2 JASPAR yes 67865800
Genes associated with rs557792634[chr5:172728828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More