EnhancerDB
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  3. rs557818309[chr1:171645490]
Enhancers that have rs557818309[chr1:171645490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171643925 171648075 enh111525
Brain (SK-N-MC)
Transcript factors that have rs557818309[chr1:171645490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171645471 171645492 IRF1 JASPAR yes 33089351
chr1 171645472 171645493 IRF1 JASPAR yes 33089352
chr1 171645475 171645490 FOXP1 JASPAR yes 33089355
chr1 171645475 171645496 IRF1 JASPAR yes 33089356
chr1 171645476 171645491 FOXP1 JASPAR yes 33089357
chr1 171645476 171645497 IRF1 JASPAR yes 33089358
chr1 171645477 171645492 FOXP1 JASPAR yes 33089359
chr1 171645477 171645498 IRF1 JASPAR yes 33089360
chr1 171645478 171645493 FOXP1 JASPAR yes 33089361
chr1 171645478 171645499 IRF1 JASPAR yes 33089362
chr1 171645479 171645494 FOXP1 JASPAR yes 33089363
chr1 171645481 171645496 FOXP1 JASPAR yes 33089364
chr1 171645482 171645503 IRF1 JASPAR yes 33089365
chr1 171645483 171645498 FOXP1 JASPAR yes 33089366
chr1 171645484 171645505 IRF1 JASPAR yes 33089367
chr1 171645486 171645500 SPIC JASPAR yes 33089368
chr1 171645486 171645500 STAT1 JASPAR yes 33089369
chr1 171645486 171645501 PRDM1 JASPAR yes 33089370
chr1 171645486 171645501 STAT2 JASPAR yes 33089371
chr1 171645486 171645507 IRF1 JASPAR yes 33089372
chr1 171645488 171645509 IRF1 JASPAR yes 33089373
Genes associated with rs557818309[chr1:171645490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More