EnhancerDB
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  3. rs557890458[chr12:58540872]
Enhancers that have rs557890458[chr12:58540872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58540265 58544435 enh80206
Prostate (PC-3) Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs557890458[chr12:58540872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58540143 58541045 ZNF143 GTRD no Epithelial (MCF-7) 21551863
chr12 58540161 58541061 ZNF143 GTRD no Epithelial (MCF-7) 21551864
chr12 58540216 58540908 ZNF143 GTRD no Epithelial (MCF-7) 21551865
chr12 58540217 58540928 ZNF143 GTRD no Epithelial (MCF-7) 21551866
chr12 58540242 58541073 ZNF143 GTRD no Epithelial (MCF-7) 21551867
chr12 58540255 58541188 ZNF143 GTRD no Epithelial (MCF-7) 21551868
chr12 58540263 58540952 ZNF143 GTRD no Epithelial (MCF-7) 21551869
chr12 58540282 58541032 ZNF143 GTRD no Epithelial (MCF-7) 21551870
chr12 58540294 58541010 ZNF143 GTRD no Epithelial (MCF-7) 21551871
chr12 58540318 58540946 ZNF143 GTRD no Epithelial (MCF-7) 21551873
chr12 58540347 58541058 ZNF143 GTRD no Epithelial (MCF-7) 21551874
chr12 58540431 58540888 ZNF143 GTRD no Epithelial (MCF-7) 21551877
chr12 58540434 58540963 ZNF143 GTRD no Epithelial (MCF-7) 21551878
chr12 58540466 58540994 ZNF143 GTRD no Epithelial (MCF-7) 21551879
chr12 58540473 58540925 ZNF143 GTRD no Epithelial (MCF-7) 21551880
chr12 58540494 58540903 ZNF143 GTRD no Epithelial (MCF-7) 21551881
chr12 58540501 58540961 ZNF143 GTRD no Epithelial (MCF-7) 21551882
chr12 58540552 58540902 ZNF143 GTRD no Epithelial (MCF-7) 21551885
chr12 58540869 58540877 FOXO3 JASPAR yes 121154408
chr12 58540870 58540879 SRY JASPAR yes 121154409
chr12 58540872 58540881 SOX9 JASPAR yes 121154410
Genes associated with rs557890458[chr12:58540872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More