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- rs558161578[chr1:153583302]
Enhancers that have rs558161578[chr1:153583302]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
153579201 |
153583975 |
enh12272 |
|
|
Transcript factors that have rs558161578[chr1:153583302]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
153582746
|
153584001
|
POLR2A
|
UCSC Txn Factor
|
no
|
Conserved
|
107831744
|
|
|
chr1
|
153582792
|
153583467
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107831745
|
|
|
chr1
|
153582979
|
153583509
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
107831746
|
|
|
chr1
|
153583283
|
153583303
|
RREB1
|
JASPAR
|
yes
|
|
32263062
|
|
|
chr1
|
153583283
|
153583678
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107831747
|
|
|
chr1
|
153583285
|
153583305
|
RREB1
|
JASPAR
|
yes
|
|
32263063
|
|
|
chr1
|
153583290
|
153583311
|
ZNF263
|
JASPAR
|
yes
|
|
32263065
|
|
|
chr1
|
153583297
|
153583306
|
SNAI2
|
JASPAR
|
yes
|
|
32263066
|
|
|
chr1
|
153583298
|
153583303
|
USF2
|
TRANSFAC
|
yes
|
|
32263067
|
|
Genes associated with rs558161578[chr1:153583302], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |