EnhancerDB
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  3. rs558336563[chr1:200086035]
Enhancers that have rs558336563[chr1:200086035]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200082785 200086935 enh108392
Lung (PC-9)
Transcript factors that have rs558336563[chr1:200086035]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200086022 200086037 HNF1A JASPAR yes 34416070
chr1 200086023 200086036 HNF1B JASPAR yes 34416071
chr1 200086025 200086035 POU6F2 JASPAR yes 34416072
chr1 200086026 200086036 ALX3 JASPAR yes 34416073
chr1 200086026 200086036 EMX1 JASPAR yes 34416074
chr1 200086026 200086036 EMX2 JASPAR yes 34416075
chr1 200086026 200086036 EN2 JASPAR yes 34416076
chr1 200086026 200086036 ESX1 JASPAR yes 34416077
chr1 200086026 200086036 EVX1 JASPAR yes 34416078
chr1 200086026 200086036 EVX2 JASPAR yes 34416079
chr1 200086026 200086036 GBX1 JASPAR yes 34416080
chr1 200086026 200086036 GBX2 JASPAR yes 34416081
chr1 200086026 200086036 GSX1 JASPAR yes 34416082
chr1 200086026 200086036 GSX2 JASPAR yes 34416083
chr1 200086026 200086036 HESX1 JASPAR yes 34416084
chr1 200086026 200086036 HOXA2 JASPAR yes 34416085
chr1 200086026 200086036 HOXB2 JASPAR yes 34416086
chr1 200086026 200086036 HOXB3 JASPAR yes 34416087
chr1 200086026 200086036 LBX2 JASPAR yes 34416088
chr1 200086026 200086036 LHX2 JASPAR yes 34416089
chr1 200086026 200086036 LHX6 JASPAR yes 34416090
chr1 200086026 200086036 MEOX1 JASPAR yes 34416091
chr1 200086026 200086036 MEOX2 JASPAR yes 34416092
chr1 200086026 200086036 MIXL1 JASPAR yes 34416093
chr1 200086026 200086036 MNX1 JASPAR yes 34416094
chr1 200086026 200086036 NOTO JASPAR yes 34416095
chr1 200086026 200086036 POU6F1 JASPAR yes 34416096
chr1 200086026 200086036 RAX JASPAR yes 34416097
chr1 200086027 200086035 BSX JASPAR yes 34416098
chr1 200086027 200086035 DLX6 JASPAR yes 34416099
chr1 200086027 200086035 EN1 JASPAR yes 34416100
chr1 200086027 200086035 ISX JASPAR yes 34416101
chr1 200086027 200086035 LBX1 JASPAR yes 34416102
chr1 200086027 200086035 LHX9 JASPAR yes 34416103
chr1 200086027 200086035 LMX1A JASPAR yes 34416104
chr1 200086027 200086035 LMX1B JASPAR yes 34416105
chr1 200086027 200086035 NKX6-1 JASPAR yes 34416106
chr1 200086027 200086035 NKX6-2 JASPAR yes 34416107
chr1 200086027 200086035 PAX4 JASPAR yes 34416108
chr1 200086027 200086035 PDX1 JASPAR yes 34416109
chr1 200086027 200086035 PRRX1 JASPAR yes 34416110
chr1 200086027 200086035 RAX2 JASPAR yes 34416111
chr1 200086027 200086035 SHOX JASPAR yes 34416112
chr1 200086027 200086035 UNCX JASPAR yes 34416113
chr1 200086027 200086035 VAX1 JASPAR yes 34416114
chr1 200086027 200086035 VAX2 JASPAR yes 34416115
chr1 200086027 200086035 VSX1 JASPAR yes 34416116
chr1 200086027 200086035 VSX2 JASPAR yes 34416117
chr1 200086032 200086035 MYB TRANSFAC yes 34416118
Genes associated with rs558336563[chr1:200086035], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More