EnhancerDB
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  3. rs55853946[chr6:108125271]
Enhancers that have rs55853946[chr6:108125271]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 108124825 108128975 enh108075
Blood (T-cell)
Transcript factors that have rs55853946[chr6:108125271]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 108125253 108125274 IRF1 JASPAR yes 104139058
chr6 108125254 108125275 IRF1 JASPAR yes 104139060
chr6 108125255 108125276 IRF1 JASPAR yes 104139061
chr6 108125259 108125274 PRDM1 JASPAR yes 104139062
chr6 108125259 108125280 IRF1 JASPAR yes 104139063
chr6 108125260 108125275 FOXP1 JASPAR yes 104139064
chr6 108125260 108125281 IRF1 JASPAR yes 104139065
chr6 108125261 108125282 IRF1 JASPAR yes 104139066
chr6 108125262 108125276 IRF7 JASPAR yes 104139067
chr6 108125265 108125280 FOXP1 JASPAR yes 104139068
chr6 108125265 108125286 IRF1 JASPAR yes 104139069
chr6 108125266 108125281 FOXP1 JASPAR yes 104139070
chr6 108125266 108125287 IRF1 JASPAR yes 104139071
chr6 108125267 108125282 FOXP1 JASPAR yes 104139072
chr6 108125267 108125288 IRF1 JASPAR yes 104139073
chr6 108125268 108125283 FOXP1 JASPAR yes 104139074
chr6 108125268 108125289 IRF1 JASPAR yes 104139075
chr6 108125269 108125284 FOXP1 JASPAR yes 104139076
chr6 108125270 108125285 FOXP1 JASPAR yes 104139077
chr6 108125271 108125286 FOXP1 JASPAR yes 104139078
chr6 108125271 108125292 IRF1 JASPAR yes 104139079
Genes associated with rs55853946[chr6:108125271], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More