EnhancerDB
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  3. rs558885488[chr6:36621246]
Enhancers that have rs558885488[chr6:36621246]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 36614945 36639164 enh9086
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558885488[chr6:36621246]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 36621242 36621254 TFAP2B JASPAR yes 101354702
chr6 36621242 36621254 TFAP2C JASPAR yes 101354703
chr6 36621242 36621257 TFAP2A JASPAR yes 101354704
Genes associated with rs558885488[chr6:36621246], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More