EnhancerDB
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  3. rs55890258[chr1:36872946]
Enhancers that have rs55890258[chr1:36872946]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 36872165 36880195 enh11740
Bone Marrow (K562) Cervix (HeLa-S3) Bone (Osteoblast) Placenta Colon (HCT116) Lung (PC-9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs55890258[chr1:36872946]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 36872934 36872949 FOXA1 JASPAR yes 28138700
chr1 36872935 36872950 FOXP1 JASPAR yes 28138701
chr1 36872936 36872947 FOXP2 JASPAR yes 28138702
chr1 36872936 36872948 FOXC2 JASPAR yes 28138703
chr1 36872937 36872948 FOXB1 JASPAR yes 28138707
chr1 36872937 36872948 FOXC1 JASPAR yes 28138708
chr1 36872937 36872949 POU3F1 JASPAR yes 28138709
chr1 36872938 36872946 FOXO3 JASPAR yes 28138716
chr1 36872938 36872949 FOXA1 JASPAR yes 28138717
chr1 36872940 36872948 FOXL1 JASPAR yes 28138718
chr1 36872946 36872967 IRF1 JASPAR yes 28138719
Genes associated with rs55890258[chr1:36872946], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More