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- rs55890406[chr17:3652789]
Enhancers that have rs55890406[chr17:3652789]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
3652285 |
3656435 |
enh107691 |
|
|
Transcript factors that have rs55890406[chr17:3652789]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
3652093
|
3656269
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108231690
|
|
|
chr17
|
3652774
|
3652791
|
RARA
|
JASPAR
|
yes
|
|
52802198
|
|
|
chr17
|
3652774
|
3652791
|
RXRA
|
JASPAR
|
yes
|
|
52802199
|
|
|
chr17
|
3652784
|
3652790
|
ZNF354C
|
JASPAR
|
yes
|
|
52802200
|
|
|
chr17
|
3652789
|
3652803
|
PLAG1
|
JASPAR
|
yes
|
|
52802201
|
|
Genes associated with rs55890406[chr17:3652789], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr17
|
3617922
|
3704537
|
-
|
ITGAE
|
ENSG00000083457.7
|
3704537
|
0
|
Thyroid
|
0.173256
|
15265
|
|