EnhancerDB
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  3. rs558919162[chr1:38592048]
Enhancers that have rs558919162[chr1:38592048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 38577965 38610495 enh26637
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Muscle (A673) Breast Muscle (Myoblast) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
chr1 38591881 38592061 vista1241
VISTA
Transcript factors that have rs558919162[chr1:38592048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 38591707 38592177 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107802877
chr1 38592034 38592049 TFAP2C JASPAR yes 28200930
chr1 38592034 38592049 TFAP2C JASPAR yes 118274571
chr1 38592036 38592048 INSM1 JASPAR yes 28200931
chr1 38592036 38592048 TFAP2A JASPAR yes 28200932
chr1 38592036 38592048 INSM1 JASPAR yes 118274572
chr1 38592036 38592048 TFAP2A JASPAR yes 118274573
chr1 38592036 38592051 TFAP2A JASPAR yes 28200933
chr1 38592036 38592051 TFAP2A JASPAR yes 118274574
chr1 38592037 38592048 TFAP2A JASPAR yes 28200934
chr1 38592037 38592048 TFAP2A JASPAR yes 118274575
Genes associated with rs558919162[chr1:38592048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More