EnhancerDB
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  3. rs558991070[chr4:4259960]
Enhancers that have rs558991070[chr4:4259960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 4259285 4264195 enh93264
Liver (HepG2)
Transcript factors that have rs558991070[chr4:4259960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 4259945 4259960 MEF2A JASPAR yes 87935827
chr4 4259948 4259963 HNF1A JASPAR yes 87935837
chr4 4259952 4259962 GSX2 JASPAR yes 87935838
chr4 4259952 4259962 HOXB2 JASPAR yes 87935839
chr4 4259952 4259962 HOXB3 JASPAR yes 87935840
chr4 4259952 4259962 MNX1 JASPAR yes 87935841
chr4 4259952 4259962 POU6F1 JASPAR yes 87935842
chr4 4259952 4259963 HOXA10 JASPAR yes 87935843
chr4 4259953 4259961 LMX1A JASPAR yes 87935844
chr4 4259953 4259961 LMX1B JASPAR yes 87935845
chr4 4259953 4259961 NKX6-1 JASPAR yes 87935846
chr4 4259953 4259961 NKX6-2 JASPAR yes 87935847
chr4 4259953 4259961 VAX1 JASPAR yes 87935848
chr4 4259953 4259961 VAX2 JASPAR yes 87935849
chr4 4259953 4259961 VSX1 JASPAR yes 87935850
chr4 4259953 4259961 VSX2 JASPAR yes 87935851
chr4 4259956 4259977 IRF1 JASPAR yes 87935852
chr4 4259957 4259972 FOXP1 JASPAR yes 87935853
chr4 4259958 4259964 TBP TRANSFAC yes 87935854
chr4 4259960 4259975 PRDM1 JASPAR yes 87935855
chr4 4259960 4259975 STAT2 JASPAR yes 87935856
Genes associated with rs558991070[chr4:4259960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More