EnhancerDB
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  3. rs55904334[chr16:27190039]
Enhancers that have rs55904334[chr16:27190039]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 27178861 27194637 enh31749
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Astrocyte Blood (OCI-LY7) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs55904334[chr16:27190039]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 27189119 27190114 ZNF143 GTRD no Epithelial (MCF-7) 21700511
chr16 27189166 27190058 ZNF143 GTRD no Epithelial (MCF-7) 21700512
chr16 27189284 27190205 TCF7L2 GTRD no Colon (HCT116) 21700514
chr16 27189426 27190093 TCF7L2 GTRD no Colon (HCT116) 21700517
chr16 27189426 27190096 ZNF143 GTRD no Epithelial (MCF-7) 21700518
chr16 27189440 27190319 TCF7L2 GTRD no Colon (HCT116) 21700519
chr16 27189486 27190317 TCF7L2 GTRD no Colon (HCT116) 21700520
chr16 27189496 27190277 TCF7L2 GTRD no Colon (HCT116) 21700521
chr16 27189720 27190175 TCF7L2 GTRD no Colon (HCT116) 21700523
chr16 27190032 27190044 ELF1 JASPAR yes 10175317
chr16 27190034 27190040 ETS1 JASPAR yes 10175318
Genes associated with rs55904334[chr16:27190039], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More