EnhancerDB
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  3. rs559275459[chr17:47966196]
Enhancers that have rs559275459[chr17:47966196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 47955625 47981555 enh17209
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Ovary Placenta Thyroid Lung (PC-9) Pancreas Epithelial (MCF-7)
Transcript factors that have rs559275459[chr17:47966196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 47965579 47966297 ZNF143 GTRD no Epithelial (MCF-7) 21769063
chr17 47965935 47966739 ZNF274 GTRD no Liver (HepG2) 21769064
chr17 47965937 47966764 ZNF274 GTRD no Liver (HepG2) 21769065
chr17 47965962 47966645 ZNF274 GTRD no Liver (HepG2) 21769066
chr17 47966018 47966713 ZNF274 GTRD no Liver (HepG2) 21769067
chr17 47966044 47966666 ZNF274 GTRD no Liver (HepG2) 21769068
chr17 47966045 47966596 ZNF274 GTRD no Liver (HepG2) 21769069
chr17 47966078 47966623 ZNF274 GTRD no Liver (HepG2) 21769070
chr17 47966082 47966552 ZNF274 GTRD no Liver (HepG2) 21769071
chr17 47966084 47966614 ZNF274 GTRD no Liver (HepG2) 21769072
chr17 47966114 47966825 ZNF274 GTRD no Liver (HepG2) 21769073
chr17 47966139 47966557 ZNF274 GTRD no Liver (HepG2) 21769074
chr17 47966188 47966209 IRF1 JASPAR yes 54665923
chr17 47966190 47966211 IRF1 JASPAR yes 54665924
chr17 47966192 47966213 IRF1 JASPAR yes 54665925
chr17 47966193 47966208 FOXP1 JASPAR yes 54665926
chr17 47966193 47966214 IRF1 JASPAR yes 54665927
chr17 47966194 47966215 IRF1 JASPAR yes 54665928
chr17 47966195 47966210 FOXP1 JASPAR yes 54665929
chr17 47966195 47966216 IRF1 JASPAR yes 54665930
chr17 47966196 47966211 FOXP1 JASPAR yes 54665931
Genes associated with rs559275459[chr17:47966196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More