EnhancerDB
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  3. rs559335929[chr5:172722622]
Enhancers that have rs559335929[chr5:172722622]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172714625 172733895 enh22820
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Breast Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs559335929[chr5:172722622]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172722621 172722632 CDX2 JASPAR yes 67864640
chr5 172722621 172722636 FOXP1 JASPAR yes 67864641
chr5 172722622 172722626 TEAD2 TRANSFAC yes 67864642
chr5 172722622 172722633 HOXA10 JASPAR yes 67864643
Genes associated with rs559335929[chr5:172722622], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More