EnhancerDB
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  3. rs559538976[chr12:102566657]
Enhancers that have rs559538976[chr12:102566657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 102559737 102568435 enh29932
Astrocyte Brain (SK-N-MC) Blood (GM12878)
Transcript factors that have rs559538976[chr12:102566657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 102566647 102566657 EMX1 JASPAR yes 123290263
chr12 102566647 102566657 EMX2 JASPAR yes 123290264
chr12 102566647 102566657 EN2 JASPAR yes 123290265
chr12 102566647 102566657 EVX1 JASPAR yes 123290266
chr12 102566647 102566657 EVX2 JASPAR yes 123290267
chr12 102566647 102566657 GBX1 JASPAR yes 123290268
chr12 102566647 102566657 GSX1 JASPAR yes 123290269
chr12 102566647 102566657 GSX2 JASPAR yes 123290270
chr12 102566647 102566657 HOXA2 JASPAR yes 123290271
chr12 102566647 102566657 HOXB2 JASPAR yes 123290272
chr12 102566647 102566657 HOXB3 JASPAR yes 123290273
chr12 102566647 102566657 MEOX1 JASPAR yes 123290274
chr12 102566647 102566657 MEOX2 JASPAR yes 123290275
chr12 102566647 102566657 MIXL1 JASPAR yes 123290276
chr12 102566648 102566661 DUXA JASPAR yes 123290285
chr12 102566649 102566660 PHOX2A JASPAR yes 123290286
chr12 102566650 102566664 IRF7 JASPAR yes 123290287
chr12 102566652 102566673 IRF1 JASPAR yes 123290288
chr12 102566656 102566668 IRF1 JASPAR yes 123290289
chr12 102566656 102566670 IRF7 JASPAR yes 123290290
chr12 102566656 102566671 IRF9 JASPAR yes 123290291
Genes associated with rs559538976[chr12:102566657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More