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- rs55954236[chr15:42336898]
Enhancers that have rs55954236[chr15:42336898]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr15 |
42333425 |
42341055 |
enh16082 |
|
|
Transcript factors that have rs55954236[chr15:42336898]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr15
|
42336890
|
42336900
|
GSX1
|
JASPAR
|
yes
|
|
23016039
|
|
|
chr15
|
42336890
|
42336900
|
GSX2
|
JASPAR
|
yes
|
|
23016040
|
|
|
chr15
|
42336890
|
42336900
|
HOXA2
|
JASPAR
|
yes
|
|
23016041
|
|
|
chr15
|
42336890
|
42336900
|
HOXB2
|
JASPAR
|
yes
|
|
23016042
|
|
|
chr15
|
42336890
|
42336900
|
HOXB3
|
JASPAR
|
yes
|
|
23016043
|
|
|
chr15
|
42336890
|
42336900
|
LHX2
|
JASPAR
|
yes
|
|
23016044
|
|
|
chr15
|
42336890
|
42336900
|
MEOX1
|
JASPAR
|
yes
|
|
23016045
|
|
|
chr15
|
42336890
|
42336900
|
MEOX2
|
JASPAR
|
yes
|
|
23016046
|
|
|
chr15
|
42336890
|
42336900
|
NOTO
|
JASPAR
|
yes
|
|
23016047
|
|
|
chr15
|
42336891
|
42336899
|
NKX6-1
|
JASPAR
|
yes
|
|
23016048
|
|
|
chr15
|
42336891
|
42336899
|
NKX6-2
|
JASPAR
|
yes
|
|
23016049
|
|
|
chr15
|
42336891
|
42336901
|
POU6F2
|
JASPAR
|
yes
|
|
23016050
|
|
Genes associated with rs55954236[chr15:42336898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |
|
chr15
|
42783431
|
42837547
|
+
|
SNAP23
|
ENSG00000092531.5
|
42783431
|
446533
|
Stomach
|
0.44193
|
13856
|
|