EnhancerDB
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  3. rs559590289[chr1:245972069]
Enhancers that have rs559590289[chr1:245972069]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 245963285 245976535 enh1020
Liver (HepG2) Brain (SK-N-SH) Large Intestine Bone (Osteoblast) Blood (GM12878) Placenta Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs559590289[chr1:245972069]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 245970920 245972247 TEF1 GTRD no Bone (Osteoblast) 21405733
chr1 245970920 245972247 TEF1 GTRD no Bone (Osteoblast) 107888914
chr1 245972049 245972070 IRF1 JASPAR yes 36799235
chr1 245972053 245972074 IRF1 JASPAR yes 36799237
chr1 245972054 245972069 FOXP1 JASPAR yes 36799238
chr1 245972056 245972071 FOXP1 JASPAR yes 36799239
chr1 245972059 245972074 FOXP1 JASPAR yes 36799240
chr1 245972059 245972074 MEF2C JASPAR yes 36799241
chr1 245972059 245972080 IRF1 JASPAR yes 36799242
chr1 245972061 245972076 FOXP1 JASPAR yes 36799243
chr1 245972067 245972082 STAT2 JASPAR yes 36799244
Genes associated with rs559590289[chr1:245972069], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More