EnhancerDB
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  3. rs559690459[chr1:153679831]
Enhancers that have rs559690459[chr1:153679831]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153676065 153683955 enh12275
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Colon (HCT116) Epithelial (MCF-7)
Transcript factors that have rs559690459[chr1:153679831]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153677232 153679909 ZNF143 GTRD no Epithelial (MCF-7) 21340066
chr1 153677249 153680045 ZNF143 GTRD no Epithelial (MCF-7) 21340067
chr1 153677354 153681717 ZNF274 GTRD no Cervix (HeLa-S3) 21340069
chr1 153677565 153679889 ZNF143 GTRD no Epithelial (MCF-7) 21340080
chr1 153677679 153679953 ZNF143 GTRD no Epithelial (MCF-7) 21340092
chr1 153678058 153679914 TCF7L2 GTRD no Colon (HCT116) 21340102
chr1 153678125 153679978 TCF7L2 GTRD no Colon (HCT116) 21340103
chr1 153678141 153680013 ZNF143 GTRD no Epithelial (MCF-7) 21340104
chr1 153678222 153680168 TCF7L2 GTRD no Colon (HCT116) 21340109
chr1 153678232 153679981 ZNF143 GTRD no Epithelial (MCF-7) 21340110
chr1 153679703 153680584 TCF7L2 GTRD no Colon (HCT116) 21340124
chr1 153679816 153679831 MEF2C JASPAR yes 32265394
chr1 153679817 153679832 MEF2A JASPAR yes 32265395
chr1 153679830 153679840 SP1 JASPAR yes 32265396
chr1 153679831 153679851 TP63 JASPAR yes 32265397
Genes associated with rs559690459[chr1:153679831], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More