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- rs561398602[chr2:220003388]
Enhancers that have rs561398602[chr2:220003388]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr2 |
220001565 |
220009395 |
enh53575 |
|
|
Transcript factors that have rs561398602[chr2:220003388]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr2
|
220003374
|
220003388
|
SPIC
|
JASPAR
|
yes
|
|
81026679
|
|
|
chr2
|
220003382
|
220003389
|
NKX3-1
|
JASPAR
|
yes
|
|
81026680
|
|
|
chr2
|
220003385
|
220003396
|
CDX2
|
JASPAR
|
yes
|
|
81026681
|
|
|
chr2
|
220003386
|
220003390
|
TEAD2
|
TRANSFAC
|
yes
|
|
81026682
|
|
|
chr2
|
220003386
|
220003397
|
HOXA10
|
JASPAR
|
yes
|
|
81026683
|
|
|
chr2
|
220003387
|
220003396
|
CDX1
|
JASPAR
|
yes
|
|
81026684
|
|
|
chr2
|
220003387
|
220003397
|
HOXA13
|
JASPAR
|
yes
|
|
81026685
|
|
|
chr2
|
220003387
|
220003397
|
HOXD13
|
JASPAR
|
yes
|
|
81026686
|
|
|
chr2
|
220003388
|
220003399
|
PROP1
|
JASPAR
|
yes
|
|
81026687
|
|
Genes associated with rs561398602[chr2:220003388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |