EnhancerDB
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  3. rs561459990[chr17:79482402]
Enhancers that have rs561459990[chr17:79482402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79480993 79489081 enh17445
Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (GM12878) Placenta Embryonic Stem Cell Line (H1-hESC) Thymus
Transcript factors that have rs561459990[chr17:79482402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79473870 79487465 POLR2A UCSC Txn Factor no Conserved 108310048
chr17 79481830 79482650 TCF7L2 GTRD no Colon (HCT116) 108310049
chr17 79481846 79482932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798199
chr17 79481846 79482932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108310050
chr17 79481937 79482573 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21798200
chr17 79481937 79482573 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108310051
chr17 79481997 79482573 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108310052
chr17 79482010 79482634 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108310053
chr17 79482043 79482619 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108310054
chr17 79482046 79482566 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310055
chr17 79482069 79482565 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108310056
chr17 79482088 79482564 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310057
chr17 79482122 79482622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798201
chr17 79482122 79482622 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108310058
chr17 79482123 79482643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21798202
chr17 79482123 79482643 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108310059
chr17 79482126 79482666 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310060
chr17 79482127 79482571 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21798203
chr17 79482127 79482571 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108310061
chr17 79482131 79482707 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310062
chr17 79482184 79482580 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108310063
chr17 79482202 79482592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108310064
chr17 79482228 79483425 ZBTB33 GTRD no Lung (A549) 108310065
chr17 79482233 79482689 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108310066
chr17 79482237 79485143 ZBTB33 GTRD no Lung (A549) 108310067
chr17 79482265 79482589 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21798204
chr17 79482265 79482589 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108310068
chr17 79482269 79482773 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310069
chr17 79482276 79482932 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310070
chr17 79482290 79482566 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108310071
chr17 79482295 79482731 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108310072
chr17 79482296 79482572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798205
chr17 79482296 79482572 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108310073
chr17 79482299 79482835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798206
chr17 79482299 79482835 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108310074
chr17 79482303 79482669 TCF7L2 GTRD no Colon (HCT116) 108310075
chr17 79482307 79482683 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108310076
chr17 79482307 79482743 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21798207
chr17 79482307 79482743 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108310077
chr17 79482386 79483284 ZBTB33 GTRD no Lung (A549) 108310078
Genes associated with rs561459990[chr17:79482402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More