EnhancerDB
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  3. rs561515220[chr17:66285143]
Enhancers that have rs561515220[chr17:66285143]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66284577 66285224 vista25676
VISTA
Transcript factors that have rs561515220[chr17:66285143]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66284371 66285151 POLR2A UCSC Txn Factor no Conserved 108286696
chr17 66284603 66285263 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286714
chr17 66284794 66285314 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286717
chr17 66284856 66285266 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286718
chr17 66284856 66285307 YY1 UCSC Txn Factor no Conserved 108286719
chr17 66284875 66285235 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286720
chr17 66284924 66285254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108286721
chr17 66284931 66285307 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108286722
chr17 66284946 66285216 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108286723
chr17 66284954 66285493 ZNF274 GTRD no Liver (HepG2) 108286724
chr17 66284961 66285251 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108286725
chr17 66284979 66285603 ZNF274 GTRD no Liver (HepG2) 108286726
chr17 66285008 66285163 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108286727
chr17 66285056 66285262 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108286728
chr17 66285074 66285530 ZNF274 GTRD no Liver (HepG2) 108286729
chr17 66285101 66285555 ZNF274 GTRD no Liver (HepG2) 108286730
chr17 66285132 66285144 TEAD1 JASPAR yes 21281430
chr17 66285142 66285146 LFA1 TRANSFAC yes 21281432
Genes associated with rs561515220[chr17:66285143], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More