EnhancerDB
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  3. rs561538788[chr2:27544070]
Enhancers that have rs561538788[chr2:27544070]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27543962 27544264 vista30775
VISTA
Transcript factors that have rs561538788[chr2:27544070]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27543807 27544583 POLR2A UCSC Txn Factor no Conserved 108431517
chr2 27543813 27544251 TFAP2C UCSC Txn Factor no Conserved 108431518
chr2 27543816 27544240 CTCF UCSC Txn Factor no Conserved 108431519
chr2 27543849 27544333 ATF3 UCSC Txn Factor no Conserved 108431520
chr2 27543864 27544234 TFAP2A UCSC Txn Factor no Conserved 108431521
chr2 27543881 27544285 MXI1 UCSC Txn Factor no Conserved 108431522
chr2 27543924 27544168 RAD21 UCSC Txn Factor no Conserved 108431523
chr2 27543936 27544207 SMC3 UCSC Txn Factor no Conserved 108431524
chr2 27543952 27544239 STAT3 UCSC Txn Factor no Conserved 108431525
chr2 27543956 27544300 FOSL2 UCSC Txn Factor no Conserved 108431526
chr2 27543965 27544303 JUND UCSC Txn Factor no Conserved 108431527
chr2 27543987 27544341 JUN UCSC Txn Factor no Conserved 108431528
chr2 27543998 27544274 FOS UCSC Txn Factor no Conserved 108431529
chr2 27544011 27544257 JUNB UCSC Txn Factor no Conserved 108431530
chr2 27544023 27544251 FOSL1 UCSC Txn Factor no Conserved 108431531
chr2 27544055 27544070 TFAP2A JASPAR yes 22022049
chr2 27544055 27544070 TFAP2C JASPAR yes 22022050
Genes associated with rs561538788[chr2:27544070], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More