EnhancerDB
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  3. rs562229899[chr5:172630500]
Enhancers that have rs562229899[chr5:172630500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172620770 172633535 enh66134
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Lung Lung (PC-9) Heart Epithelial (MCF-7)
Transcript factors that have rs562229899[chr5:172630500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172630480 172630501 IRF1 JASPAR yes 67858481
chr5 172630482 172630503 IRF1 JASPAR yes 67858482
chr5 172630486 172630507 IRF1 JASPAR yes 67858483
chr5 172630488 172630503 PRDM1 JASPAR yes 67858484
chr5 172630488 172630503 STAT2 JASPAR yes 67858485
chr5 172630488 172630509 ZNF263 JASPAR yes 67858486
chr5 172630489 172630503 SPIC JASPAR yes 67858487
chr5 172630489 172630503 STAT1 JASPAR yes 67858488
chr5 172630490 172630504 IRF7 JASPAR yes 67858489
chr5 172630490 172630504 IRF8 JASPAR yes 67858490
chr5 172630490 172630505 IRF9 JASPAR yes 67858491
chr5 172630490 172630511 IRF1 JASPAR yes 67858492
chr5 172630491 172630506 FOXP1 JASPAR yes 67858493
chr5 172630492 172630507 PRDM1 JASPAR yes 67858494
chr5 172630492 172630507 STAT2 JASPAR yes 67858495
chr5 172630492 172630513 IRF1 JASPAR yes 67858496
chr5 172630496 172630517 IRF1 JASPAR yes 67858497
chr5 172630496 172630517 ZNF263 JASPAR yes 67858498
chr5 172630497 172630518 ZNF263 JASPAR yes 67858499
chr5 172630500 172630521 IRF1 JASPAR yes 67858500
chr5 172630500 172630521 ZNF263 JASPAR yes 67858501
Genes associated with rs562229899[chr5:172630500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More