EnhancerDB
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Enhancers that have rs562302[chr1:110641197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 110635397 110647375 enh12132
Placenta Brain (SK-N-SH) Cervix (HeLa-S3) Lung (PC-9)
Transcript factors that have rs562302[chr1:110641197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 110640837 110641341 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328731
chr1 110640919 110641383 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328732
chr1 110641019 110641283 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328733
chr1 110641086 110641301 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328734
chr1 110641089 110641749 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328735
chr1 110641099 110641330 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328736
chr1 110641127 110641643 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21328737
chr1 110641189 110641204 TFAP2A JASPAR yes 31464619
chr1 110641191 110641203 TFAP2A JASPAR yes 31464620
chr1 110641191 110641203 TFAP2B JASPAR yes 31464621
chr1 110641191 110641203 TFAP2C JASPAR yes 31464622
chr1 110641191 110641206 TFAP2A JASPAR yes 31464623
chr1 110641191 110641206 TFAP2C JASPAR yes 31464624
chr1 110641192 110641201 TFAP2A JASPAR yes 31464625
chr1 110641192 110641203 EBF1 JASPAR yes 31464626
chr1 110641193 110641202 TFAP2A JASPAR yes 31464627
chr1 110641197 110641202 SP1 TRANSFAC yes 31464628
Genes associated with rs562302[chr1:110641197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More