EnhancerDB
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  3. rs562543941[chr1:153677905]
Enhancers that have rs562543941[chr1:153677905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 153676065 153683955 enh12275
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Colon (HCT116) Epithelial (MCF-7)
Transcript factors that have rs562543941[chr1:153677905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 153677212 153679155 ZNF274 GTRD no Cervix (HeLa-S3) 21340065
chr1 153677232 153679909 ZNF143 GTRD no Epithelial (MCF-7) 21340066
chr1 153677249 153680045 ZNF143 GTRD no Epithelial (MCF-7) 21340067
chr1 153677255 153678654 ZNF274 GTRD no Cervix (HeLa-S3) 21340068
chr1 153677354 153681717 ZNF274 GTRD no Cervix (HeLa-S3) 21340069
chr1 153677409 153679537 ZNF274 GTRD no Cervix (HeLa-S3) 21340070
chr1 153677437 153679057 ZNF143 GTRD no Epithelial (MCF-7) 21340071
chr1 153677450 153678342 ZNF274 GTRD no Cervix (HeLa-S3) 21340072
chr1 153677534 153679400 ZNF143 GTRD no Epithelial (MCF-7) 21340073
chr1 153677544 153678254 ZNF274 GTRD no Cervix (HeLa-S3) 21340074
chr1 153677547 153679272 ZNF274 GTRD no Cervix (HeLa-S3) 21340075
chr1 153677551 153678381 ZNF143 GTRD no Epithelial (MCF-7) 21340076
chr1 153677551 153679338 ZNF274 GTRD no Cervix (HeLa-S3) 21340077
chr1 153677553 153678414 ZNF143 GTRD no Epithelial (MCF-7) 21340078
chr1 153677561 153679170 ZNF143 GTRD no Epithelial (MCF-7) 21340079
chr1 153677565 153679889 ZNF143 GTRD no Epithelial (MCF-7) 21340080
chr1 153677568 153678260 ZNF143 GTRD no Epithelial (MCF-7) 21340081
chr1 153677575 153679616 ZNF274 GTRD no Cervix (HeLa-S3) 21340082
chr1 153677580 153679278 ZNF274 GTRD no Cervix (HeLa-S3) 21340083
chr1 153677593 153679078 ZNF274 GTRD no Cervix (HeLa-S3) 21340084
chr1 153677602 153679071 ZNF274 GTRD no Cervix (HeLa-S3) 21340085
chr1 153677608 153678056 ZNF143 GTRD no Epithelial (MCF-7) 21340086
chr1 153677612 153679466 ZNF143 GTRD no Epithelial (MCF-7) 21340087
chr1 153677614 153678175 ZNF143 GTRD no Epithelial (MCF-7) 21340088
chr1 153677647 153678062 ZNF143 GTRD no Epithelial (MCF-7) 21340089
chr1 153677647 153679574 ZNF143 GTRD no Epithelial (MCF-7) 21340090
chr1 153677652 153678116 ZNF274 GTRD no Cervix (HeLa-S3) 21340091
chr1 153677679 153679953 ZNF143 GTRD no Epithelial (MCF-7) 21340092
chr1 153677696 153679504 ZNF143 GTRD no Epithelial (MCF-7) 21340093
chr1 153677730 153678023 ZNF143 GTRD no Epithelial (MCF-7) 21340094
chr1 153677737 153677965 TCF7L2 GTRD no Colon (HCT116) 21340095
chr1 153677740 153678244 ZNF143 GTRD no Epithelial (MCF-7) 21340096
chr1 153677746 153678772 TCF7L2 GTRD no Colon (HCT116) 21340097
chr1 153677754 153678035 ZNF143 GTRD no Epithelial (MCF-7) 21340098
chr1 153677776 153678150 ZNF143 GTRD no Epithelial (MCF-7) 21340099
chr1 153677855 153678430 ZNF274 GTRD no Cervix (HeLa-S3) 21340100
Genes associated with rs562543941[chr1:153677905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More