EnhancerDB
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  3. rs562704860[chr1:26909484]
Enhancers that have rs562704860[chr1:26909484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 26905405 26912923 enh78984
Prostate (PC-3) Bone (Osteoblast) Blood (GM12878) Colon (HCT116)
chr1 26909250 26909546 vista878
VISTA
Transcript factors that have rs562704860[chr1:26909484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 26909005 26909595 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802546
chr1 26909469 26909487 TP73 JASPAR yes 27642760
chr1 26909469 26909487 TP73 JASPAR yes 118255852
chr1 26909470 26909484 JUN JASPAR yes 27642761
chr1 26909470 26909484 JUN JASPAR yes 118255853
chr1 26909474 26909485 NFE2 JASPAR yes 27642762
chr1 26909474 26909485 NFE2 JASPAR yes 118255854
chr1 26909475 26909484 JDP2 JASPAR yes 27642763
chr1 26909475 26909484 JDP2 JASPAR yes 118255855
chr1 26909475 26909488 ZBTB18 JASPAR yes 27642764
chr1 26909475 26909488 ZBTB18 JASPAR yes 118255856
chr1 26909476 26909488 HES5 JASPAR yes 27642765
chr1 26909476 26909488 PKNOX1 JASPAR yes 27642766
chr1 26909476 26909488 TGIF2 JASPAR yes 27642767
chr1 26909476 26909488 HES5 JASPAR yes 118255857
chr1 26909476 26909488 PKNOX1 JASPAR yes 118255858
chr1 26909476 26909488 TGIF2 JASPAR yes 118255859
chr1 26909477 26909487 CLOCK JASPAR yes 27642768
chr1 26909477 26909487 NEUROG2 JASPAR yes 27642769
chr1 26909477 26909487 CLOCK JASPAR yes 118255860
chr1 26909477 26909487 NEUROG2 JASPAR yes 118255861
Genes associated with rs562704860[chr1:26909484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More