EnhancerDB
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  3. rs56270790[chr12:54425000]
Enhancers that have rs56270790[chr12:54425000]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54424968 54425277 vista13559
VISTA
Transcript factors that have rs56270790[chr12:54425000]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54416396 54430153 ZNF274 GTRD no Cervix (HeLa-S3) 107686659
chr12 54416396 54430153 ZNF274 GTRD no Cervix (HeLa-S3) 108036936
chr12 54416396 54430153 ZNF274 GTRD no Cervix (HeLa-S3) 108036937
chr12 54423064 54425072 ZNF274 GTRD no Cervix (HeLa-S3) 108036955
chr12 54423226 54425946 EZH2 UCSC Txn Factor no Conserved 108036956
chr12 54424220 54425014 ZBTB33 GTRD no Lung (A549) 108036957
chr12 54424406 54425668 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036958
chr12 54424589 54425195 ZNF143 GTRD no Epithelial (MCF-7) 108036959
chr12 54424743 54425053 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036960
chr12 54424858 54425458 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036961
chr12 54424959 54425215 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108036962
chr12 54424961 54425225 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036963
chr12 54424997 54425015 ESR1 JASPAR yes 82411574
Genes associated with rs56270790[chr12:54425000], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More