-
Home
- SNP
- rs562760318[chr1:212671857]
Enhancers that have rs562760318[chr1:212671857]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr1 |
212669556 |
212673848 |
enh27470 |
|
|
| chr1 |
212671541 |
212672116 |
vista5008 |
|
|
Transcript factors that have rs562760318[chr1:212671857]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr1
|
212670346
|
212672317
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868704
|
|
|
chr1
|
212670804
|
212672165
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868705
|
|
|
chr1
|
212670923
|
212672151
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868706
|
|
|
chr1
|
212670991
|
212672151
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868708
|
|
|
chr1
|
212671075
|
212672065
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868709
|
|
|
chr1
|
212671145
|
212671977
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868711
|
|
|
chr1
|
212671161
|
212672026
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868712
|
|
|
chr1
|
212671209
|
212672376
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868714
|
|
|
chr1
|
212671254
|
212672141
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868716
|
|
|
chr1
|
212671268
|
212672251
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868717
|
|
|
chr1
|
212671320
|
212672115
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868718
|
|
|
chr1
|
212671321
|
212672202
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868719
|
|
|
chr1
|
212671350
|
212672258
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868720
|
|
|
chr1
|
212671377
|
212672175
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868721
|
|
|
chr1
|
212671389
|
212671984
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868722
|
|
|
chr1
|
212671391
|
212671982
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868723
|
|
|
chr1
|
212671399
|
212672102
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868725
|
|
|
chr1
|
212671399
|
212672121
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868726
|
|
|
chr1
|
212671419
|
212672096
|
MYOD
|
GTRD
|
no
|
Muscle (Myoblast)
|
107868727
|
|
|
chr1
|
212671434
|
212672128
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868728
|
|
|
chr1
|
212671447
|
212672330
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868729
|
|
|
chr1
|
212671467
|
212672311
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868730
|
|
|
chr1
|
212671469
|
212672149
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868731
|
|
|
chr1
|
212671472
|
212672305
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868732
|
|
|
chr1
|
212671513
|
212672111
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
107868733
|
|
|
chr1
|
212671531
|
212672194
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868734
|
|
|
chr1
|
212671534
|
212672180
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868735
|
|
|
chr1
|
212671546
|
212672239
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
107868736
|
|
|
chr1
|
212671557
|
212672171
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868737
|
|
|
chr1
|
212671563
|
212672170
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868738
|
|
|
chr1
|
212671580
|
212672089
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868739
|
|
|
chr1
|
212671582
|
212671912
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Cervix (HeLa-S3)
|
107868740
|
|
|
chr1
|
212671593
|
212672187
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868741
|
|
|
chr1
|
212671599
|
212671879
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107868742
|
|
|
chr1
|
212671601
|
212671925
|
CEBPB
|
UCSC Txn Factor
|
no
|
Conserved
|
107868743
|
|
|
chr1
|
212671601
|
212671925
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107868744
|
|
|
chr1
|
212671633
|
212672267
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868746
|
|
|
chr1
|
212671643
|
212671949
|
STAT3
|
UCSC Txn Factor
|
no
|
Conserved
|
107868747
|
|
|
chr1
|
212671664
|
212672274
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868749
|
|
|
chr1
|
212671677
|
212671921
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107868750
|
|
|
chr1
|
212671711
|
212672058
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
107868751
|
|
|
chr1
|
212671714
|
212672010
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107868752
|
|
|
chr1
|
212671727
|
212672134
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
107868753
|
|
|
chr1
|
212671731
|
212671947
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107868754
|
|
|
chr1
|
212671742
|
212671942
|
ZNF274
|
ENCODE Uniform TFBS
|
no
|
Bone Marrow (K562)
|
107868755
|
|
|
chr1
|
212671763
|
212671891
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107868756
|
|
|
chr1
|
212671780
|
212672070
|
ZZZ3
|
ENCODE Uniform TFBS
|
no
|
Blood (GM12878)
|
107868757
|
|
|
chr1
|
212671841
|
212671857
|
RFX4
|
JASPAR
|
yes
|
|
35130897
|
|
|
chr1
|
212671841
|
212671857
|
RFX4
|
JASPAR
|
yes
|
|
118453583
|
|
|
chr1
|
212671849
|
212671857
|
FOXC1
|
JASPAR
|
yes
|
|
35130899
|
|
|
chr1
|
212671849
|
212671857
|
FOXC1
|
JASPAR
|
yes
|
|
118453585
|
|
Genes associated with rs562760318[chr1:212671857], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |