EnhancerDB
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  3. rs562788056[chr1:116833657]
Enhancers that have rs562788056[chr1:116833657]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116827040 116837335 enh579
Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs562788056[chr1:116833657]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116832491 116833791 ZNF274 GTRD no Blood (GM12878) 21331869
chr1 116832674 116833751 ZNF274 GTRD no Blood (GM12878) 21331870
chr1 116832962 116833807 ZNF274 GTRD no Blood (GM12878) 21331872
chr1 116833650 116833664 NR2F1 JASPAR yes 31790267
Genes associated with rs562788056[chr1:116833657], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More